Commits for braney

v329_base to v330_preview (2016-02-29 to 2016-03-07) v330

• add alpha tag to cramTest track in hg19
  
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 1, context: html, text, full: html, text
• set up udcCacheDir in hgApi to fix metadata links in hgTrackUi
  
  • src/hg/hgApi/hgApi.c - lines changed 1, context: html, text, full: html, text
• fix bug in outputting sequence in the table browser for refSeq table
  
  • src/hg/hgTables/seqOut.c - lines changed 1, context: html, text, full: html, text
• a check for validity in mm10 SNP
  
  • src/hg/makeDb/doc/mm10.txt - lines changed 6, context: html, text, full: html, text
• restore align.dbs to include all the current assemblies
  
  • src/hg/makeDb/genbank/etc/align.dbs - lines changed 193, context: html, text, full: html, text
• an alignment for a collaboration with WashU
  
  • src/hg/makeDb/trackDb/lizard/anoCar2/trackDb.ra - lines changed 14, context: html, text, full: html, text