Commits for galt

v331_preview2 to v331_base (2016-04-04 to 2016-04-11) v331

• Merge remote-tracking branch 'origin/master'
  
• Fixing gtexGene for limitedVis full->pack->squish->dense
  
  • src/hg/hgTracks/gtexTracks.c - lines changed 18, context: html, text, full: html, text
• resolved merge conflict
  
  • src/hg/hgTracks/gtexTracks.c - lines changed 40, context: html, text, full: html, text
• Fixed scope of height variable. Created some separation between height and lineHeight since they are being used differently.
  
  • src/hg/hgTracks/gtexTracks.c - lines changed 5, context: html, text, full: html, text
• trying to clarify and simplify the variables used in gtex totalHeight.
  
  • src/hg/hgTracks/gtexTracks.c - lines changed 14, context: html, text, full: html, text
• fixing gtex for multi-region. oops needs to search list for matchin ss by vis now since ss is a list.
  
  • src/hg/hgTracks/gtexTracks.c - lines changed 3, context: html, text, full: html, text
  • src/hg/hgTracks/hgTracks.h - lines changed 3, context: html, text, full: html, text
  • src/hg/hgTracks/simpleTracks.c - lines changed 1, context: html, text, full: html, text
• Fixes problem where altGraphX creates special spaceSavers without setting the window and vis fields
  
  • src/hg/hgTracks/simpleTracks.c - lines changed 5, context: html, text, full: html, text