adfc445f218cabffc38836906796e6df20a46e2d
kate
Mon Mar 21 12:57:01 2016 -0700
Indicate assembly next to genomic position on item details. refs #15645
diff --git src/hg/hgc/gtexClick.c src/hg/hgc/gtexClick.c
index bc73e57..79f37cb 100644
--- src/hg/hgc/gtexClick.c
+++ src/hg/hgc/gtexClick.c
@@ -229,32 +229,32 @@
if (desc == NULL)
printf("%s
\n", gtexGene->name);
else
{
printf("%s
\n",
hgGeneName(), database, gtexGene->name, gtexGene->name);
printf("Description: %s
\n", desc);
}
printf("Ensembl Gene ID: %s
\n", gtexGene->geneId);
// The actual transcript model is a union, so this identification is approximate
// (used just to find a transcript class)
char *geneClass = gtexGeneClass(gtexGene);
printf("GENCODE Biotype: %s
\n", gtexGene->geneType);
printf("Gene Class: %s
\n",
geneClassColorCode(geneClass), geneClass);
-printf("Genomic Position: %s:%d-%d
\n",
- hgTracksPathAndSettings(), database,
+printf("Genomic Position: %s %s:%d-%d
\n",
+ database, hgTracksPathAndSettings(), database,
gtexGene->chrom, gtexGene->chromStart+1, gtexGene->chromEnd,
gtexGene->chrom, gtexGene->chromStart+1, gtexGene->chromEnd);
printf("View at GTEx portal
\n", gtexGene->geneId);
puts("
"); boolean doLogTransform = cartUsualBooleanClosestToHome(cart, tdb, FALSE, GTEX_LOG_TRANSFORM, GTEX_LOG_TRANSFORM_DEFAULT); double maxVal = 0.0; char *versionSuffix = gtexVersionSuffix(tdb->table); struct tissueSampleVals *tsvs = getTissueSampleVals(gtexGene, doLogTransform, versionSuffix, &maxVal); char *version = gtexVersion(tdb->table); drawGtexRBoxplot(gtexGene, tsvs, doLogTransform, version); printTrackHtml(tdb);