529fd44f904b874ea9b1a5bc80fe5dec3a5970a8 kate Wed Mar 23 15:16:33 2016 -0700 Add checkbox to limit to protein coding genes (I keep wanting this option during testing.). refs #15645 diff --git src/hg/inc/gtexGeneBed.h src/hg/inc/gtexGeneBed.h index 60aae68..c820b9c 100644 --- src/hg/inc/gtexGeneBed.h +++ src/hg/inc/gtexGeneBed.h @@ -77,17 +77,20 @@ #define gtexGeneBedCommaOut(el,f) gtexGeneBedOutput(el,f,',',','); /* Print out gtexGeneBed as a comma separated list including final comma. */ /* -------------------------------- End autoSql Generated Code -------------------------------- */ void gtexGeneBedCreateTable(struct sqlConnection *conn, char *table); /* Create expression record format table of given name. */ char *gtexVersionSuffix(char *table); /* Return version string for a GTEx track table. For now, just supporting V4 (no suffix) and V6 */ char *gtexGeneClass(struct gtexGeneBed *geneBed); /* Return gene "class" (analogous to GENCODE transcriptClass) for a GENCODE gene biotype */ +boolean gtexGeneIsCoding(struct gtexGeneBed *geneBed); +/* Return TRUE if biotype indicates this is a protein coding gene */ + #endif /* GTEXGENEBED_H */