d6039d2a5b455ea12543034b5f959886d6d7e51f kate Thu Mar 24 20:45:39 2016 -0700 1. Add -log option to bedScore. 2. Score GTEx gene track bed files based on total median expression level across all tissues, for use in dense mode (gray-scale based on total expression), and display score on details page. 3. Implement viz for squished mode -- show color of highest expressed tissue if over threshold, and show tissue name in mouseover. refs #15645 diff --git src/lib/tests/makefile src/lib/tests/makefile index b65258d..88e81c4 100644 --- src/lib/tests/makefile +++ src/lib/tests/makefile @@ -1,37 +1,40 @@ include ../../inc/common.mk ifeq (${USE_TABIX},1) TABIX_TESTS=tabixTest vcfTest else TABIX_TESTS= endif MYLIBDIR = ../../lib/${MACHTYPE} MYLIBS = ${MYLIBDIR}/jkweb.a BIN_DIR = bin/${MACHTYPE} test: errCatchTest htmlPageTest htmlExpandUrlTest pipelineTests dyStringTest \ mimeTests base64Tests quotedPTests safeTest hashTest fetchUrlTest gff3Test \ - ${TABIX_TESTS} hacTreeTest + ${TABIX_TESTS} hacTreeTest testSumDoubles rm -r output fetchUrlTest @echo tested all mkdirs: ${MKDIR} output ${BIN_DIR} +testSumDoubles: testSumDoubles.o ${MYLIBS} + ${CC} ${COPT} -o ./testSumDoubles testSumDoubles.o ${MYLIBS} ${L} + errCatchTest: errCatchTest.o ${MYLIBS} mkdirs ${CC} ${COPT} -o ${BIN_DIR}/errCatchTest errCatchTest.o ${MYLIBS} ${L} ${STRIP} ${BIN_DIR}/errCatchTest${EXE} ${BIN_DIR}/errCatchTest secret > output/errCatch.good diff expected/errCatch.good output/errCatch.good ${BIN_DIR}/errCatchTest bad > output/errCatch.bad diff expected/errCatch.bad output/errCatch.bad htmlExpandUrlTest: htmlExpandUrlTest.o ${MYLIBS} mkdirs ${CC} ${COPT} -o ${BIN_DIR}/htmlExpandUrlTest htmlExpandUrlTest.o ${MYLIBS} ${L} ${STRIP} ${BIN_DIR}/htmlExpandUrlTest${EXE} ${BIN_DIR}/htmlExpandUrlTest > output/htmlExpandUrlTest 2>&1 diff expected/htmlExpandUrlTest output/htmlExpandUrlTest htmlPageTest: htmlPageTest.o ${MYLIBS} mkdirs