b3afed1479ffa80ba9615108abb29836b8dd1fdc
kate
  Mon Mar 28 18:06:42 2016 -0700
Add total expression to details page.  Correct map box size problem. refs #15645

diff --git src/hg/hgc/gtexClick.c src/hg/hgc/gtexClick.c
index 4190e1d..68f4664 100644
--- src/hg/hgc/gtexClick.c
+++ src/hg/hgc/gtexClick.c
@@ -219,41 +219,42 @@
 struct gtexGeneBed *gtexGene = getGtexGene(item, tdb->table);
 if (gtexGene == NULL)
     errAbort("Can't find gene %s in GTEx gene table %s\n", item, tdb->table);
 
 genericHeader(tdb, item);
 printf("<b>Gene: </b>");
 char *desc = getGeneDescription(gtexGene);
 if (desc == NULL)
     printf("%s<br>\n", gtexGene->name);
 else
     {
     printf("<a target='_blank' href='%s?db=%s&hgg_gene=%s'>%s</a><br>\n", 
                         hgGeneName(), database, gtexGene->name, gtexGene->name);
     printf("<b>Description:</b> %s<br>\n", desc);
     }
-printf("<b>Ensembl Gene ID:</b> %s<br>\n", gtexGene->geneId);
+printf("<b>Ensembl gene ID:</b> %s<br>\n", gtexGene->geneId);
 // The actual transcript model is a union, so this identification is approximate
 // (used just to find a transcript class)
 char *geneClass = gtexGeneClass(gtexGene);
-printf("<b>GENCODE Biotype: </b> %s<br>\n", gtexGene->geneType); 
-printf("<b>Gene Class: </b><span style='color: %s'>%s</span><br>\n", 
+printf("<b>GENCODE biotype: </b> %s<br>\n", gtexGene->geneType); 
+printf("<b>Gene class: </b><span style='color: %s'>%s</span><br>\n", 
             geneClassColorCode(geneClass), geneClass);
-printf("<b>Genomic Position: </b>%s <a href='%s&db=%s&position=%s%%3A%d-%d'>%s:%d-%d</a><br>\n", 
+printf("<b>Total median expression: </b> %0.2f RPKM<br>\n", gtexGeneTotalMedianExpression(gtexGene));
+printf("<b>Score: </b> %d<br>\n", gtexGene->score); 
+printf("<b>Genomic position: </b>%s <a href='%s&db=%s&position=%s%%3A%d-%d'>%s:%d-%d</a><br>\n", 
                         database, hgTracksPathAndSettings(), database, 
                         gtexGene->chrom, gtexGene->chromStart+1, gtexGene->chromEnd,
                         gtexGene->chrom, gtexGene->chromStart+1, gtexGene->chromEnd);
-printf("<b>Score: </b> %d<br>\n", gtexGene->score); 
-printf("<a target='_blank' href='http://www.gtexportal.org/home/gene/%s'>View at GTEx portal</a><br>\n", gtexGene->name);
 puts("<p>");
 
 boolean doLogTransform = cartUsualBooleanClosestToHome(cart, tdb, FALSE, GTEX_LOG_TRANSFORM,
                                                 GTEX_LOG_TRANSFORM_DEFAULT);
 double maxVal = 0.0;
 char *versionSuffix = gtexVersionSuffix(tdb->table);
 struct tissueSampleVals *tsvs = getTissueSampleVals(gtexGene, doLogTransform, 
                                                         versionSuffix, &maxVal);
 char *version = gtexVersion(tdb->table);
 drawGtexRBoxplot(gtexGene, tsvs, doLogTransform, version);
+printf("<br><a target='_blank' href='http://www.gtexportal.org/home/gene/%s'>View at GTEx portal</a>\n", gtexGene->name);
 
 printTrackHtml(tdb);
 }