85e7461e2142b0bc71be2d905f2a5c705d1fa71f
hiram
Thu Apr 14 13:23:18 2016 -0700
adding Entrez nuccore link to gold fragment details page refs #17168
diff --git src/hg/hgc/hgc.c src/hg/hgc/hgc.c
index 61becef..ecf1181 100644
--- src/hg/hgc/hgc.c
+++ src/hg/hgc/hgc.c
@@ -6422,30 +6422,31 @@
char *accession1, *accession2, *spanner, *variation, *varEvidence,
*contact, *remark, *comment;
// char *evaluation; unused variable
char *secondAcc, *secondAccVer;
char *tmpString;
int first;
cartWebStart(cart, database, "%s", fragName);
hFindSplitTable(database, seqName, tdb->table, splitTable, &hasBin);
sqlSafef(query, sizeof query, "select * from %s where frag = '%s' and chromStart = %d",
splitTable, fragName, start);
sr = sqlMustGetResult(conn, query);
row = sqlNextRow(sr);
agpFragStaticLoad(row+hasBin, &frag);
+printf("Entrez nucleotide: %s
\n", fragName, fragName);
printf("Clone Fragment ID: %s
\n", frag.frag);
printf("Clone Fragment Type: %s
\n", frag.type);
printf("Clone Bases: %d-%d
\n", frag.fragStart+1, frag.fragEnd);
if (hTableExists(database, "contigAcc"))
{
sqlSafef(query2, sizeof query2, "select * from contigAcc where contig = '%s'", frag.frag);
if ((sr2 = sqlGetResult(conn2, query2)))
{
row = sqlNextRow(sr2);
if (row)
{
contigAccStaticLoad(row, &contigAcc);
printf("Genbank Accession: