000226be7ecaa7674455d3968af3590ff2a047b3 kate Thu Apr 28 13:13:40 2016 -0700 Add GTEx gene expression boxplot to hg38 and hg19 hgGene pages. Remove old GTEx link. refs #17244 diff --git src/hg/inc/gtexUi.h src/hg/inc/gtexUi.h index 7736242..162bfbf 100644 --- src/hg/inc/gtexUi.h +++ src/hg/inc/gtexUi.h @@ -46,16 +46,25 @@ #define GTEX_GRAPH_RAW "raw" #define GTEX_GRAPH_NORMAL "normalized" #define GTEX_GRAPH_DEFAULT GTEX_GRAPH_RAW /* Tissue filter */ #define GTEX_TISSUE_SELECT "tissues" /* Gene filter */ #define GTEX_CODING_GENE_FILTER "codingOnly" #define GTEX_CODING_GENE_FILTER_DEFAULT FALSE /* Hide exons */ #define GTEX_SHOW_EXONS "showExons" #define GTEX_SHOW_EXONS_DEFAULT FALSE +void gtexPortalLink(char *geneId); +/* print URL to GTEX portal gene expression page using Ensembl Gene Id*/ + +boolean gtexGeneBoxplot(char *geneId, char *geneName, char *version, + boolean doLogTransform, struct tempName *pngTn); +/* Create a png temp file with boxplot of GTEx expression values for this gene. + * GeneId is the Ensembl gene ID. GeneName is the HUGO name, used for graph title; + * If NULL, label with the Ensembl gene ID */ + #endif /* GTEXUI_H */