762c15a711cbc708476298a975dc324de82e992b braney Wed May 11 12:32:48 2016 -0700 changed CRAM download pending message #14717 diff --git src/lib/bamFile.c src/lib/bamFile.c index 9ce63ba..6290ee9 100644 --- src/lib/bamFile.c +++ src/lib/bamFile.c @@ -246,31 +246,31 @@ makeDirsOnPath(pendingFile); sprintf(pendingFile, "%s/pending/%s",cacheDir,md5String); FILE *downFile; if ((downFile = fopen(errorFile, "r")) != NULL) { char errorBuf[4096]; mustGetLine(downFile, errorBuf, sizeof errorBuf); errAbort("cannot find reference %s. Error: %s\n", md5String,errorBuf); } else { if ((downFile = fopen(pendingFile, "w")) == NULL) errAbort("cannot find reference %s. Cannot create file %s.",md5String, pendingFile); fprintf(downFile, "%s\n", server); fclose(downFile); - errAbort("cannot find reference %s. Downloading from %s. Pending in %s",md5String, server, pendingFile); + errAbort("Cannot find reference %s. Downloading from %s. Please refresh screen to check download status.",md5String, server); } } } #else int chromId, start, end; int ret = bam_parse_region(samfile->header, position, &chromId, &start, &end); if (ret != 0 && startsWith("chr", position)) ret = bam_parse_region(samfile->header, position+strlen("chr"), &chromId, &start, &end); if (ret != 0) // If the bam file does not cover the current chromosome, OK return; ret = bam_fetch(samfile->x.bam, idx, chromId, start, end, callbackData, callbackFunc); if (ret != 0) warn("bam_fetch(%s, %s (chromId=%d) failed (%d)", bamFileName, position, chromId, ret); #endif