Commits for kent

v334_preview2 to v334_base (2016-06-06 to 2016-06-13) v334

a39cf17bd648ebf89f823e6a32ea9edae1ec82b6 Wed May 25 15:50:23 2016 -0700

• Improving error message.
  
  • src/lib/htmlPage.c - lines changed 1, context: html, text, full: html, text

5f552f1a0ee9b190c5c88434da3327c323afc797 Wed Jun 8 14:26:20 2016 -0700

• Moving bits of tdbQuery that checked for fields not existing in a query statement to rqlParse.c, and making cdwQuery do this check as well.
  
  • src/hg/cirm/cdw/cdwQuery/cdwQuery.c - lines changed 1, context: html, text, full: html, text
  • src/hg/utils/tdbQuery/tdbQuery.c - lines changed 100, context: html, text, full: html, text
  • src/inc/rql.h - lines changed 8, context: html, text, full: html, text
  • src/lib/rqlParse.c - lines changed 102, context: html, text, full: html, text

26bef6a063e059b25da8ed4f2a102305f6cc6ed7 Wed Jun 8 14:28:22 2016 -0700

• Making it so that rql queries to cdw tags are checked for nonexistent fields.
  
  • src/hg/cirm/cdw/inc/cdwLib.h - lines changed 3, context: html, text, full: html, text
  • src/hg/cirm/cdw/lib/cdwLib.c - lines changed 11, context: html, text, full: html, text

faa36478617263d289e1edd79d8d941c36c4dd8c Wed Jun 8 14:30:46 2016 -0700

• Adding ensureNamesCaseUnique library function to check for symbol conflicts in a case-insensitive way giving a symbol list. This is used to precheck when defining a SQL table from a tagStorm, since tagStorm is case sensitive but SQL is not.
  
  • src/inc/obscure.h - lines changed 3, context: html, text, full: html, text
  • src/lib/obscure.c - lines changed 28, context: html, text, full: html, text

741b0531d412a34731ada11992985903e1a30ce7 Wed Jun 8 14:51:01 2016 -0700

• Adding additional checks on casing of GEO tags.
  
  • src/hg/cirm/cdw/lib/cdwValid.c - lines changed 13, context: html, text, full: html, text

cf9cd3ef793f93183997f5d908f3eb27fc84ec9d Wed Jun 8 14:52:39 2016 -0700

• Checking that all fields in cdwFileTags would be unique in a case insensitive way before deleting old table. Getting rid of unused items in cdwMetaTags table.
  
  • src/hg/cirm/cdw/cdwMakeFileTags/cdwMakeFileTags.c - lines changed 42, context: html, text, full: html, text