d4602fb53954917fe94513be398074f0ff03b23f max Mon Jun 6 16:55:11 2016 -0700 adding imagemagick to gbib, refs #15312 diff --git src/browserbox/root/updateBrowser.sh src/browserbox/root/updateBrowser.sh index 8f98202..b89f55e 100755 --- src/browserbox/root/updateBrowser.sh +++ src/browserbox/root/updateBrowser.sh @@ -214,30 +214,38 @@ apt-get install -y linux-headers-generic apt-get install -y virtualbox-guest-dkms apt-get -y autoremove /etc/init.d/vboxadd start fi # install R for the gtex tracks if apt-cache policy r-base | grep "Installed: .none." > /dev/null; then echo - Installing R apt-get update apt-get --no-install-recommends install -y r-base-core apt-get -y autoremove fi +# install imagemagick for the session gallery +if apt-cache policy imagemagick | grep "Installed: .none." > /dev/null; then + echo - Installing imagemagick + apt-get update + apt-get --no-install-recommends install -y imagemagick + apt-get -y autoremove +fi + echo echo - Updating the genome browser software via rsync: # CGI-BIN and HTDOCS: # the parameter "hgwdev" copies over only the beta/alpha CGIs from hgwdev if [ "$1" == "hgwdev" ] ; then # note the missing -u option to RSYNC: in hgwdev mode, we want to overwrite everything. # On a development machine, the developer might have touched a file # for testing. We want to make sure that all local files are overwritten by the # files on hgwdev RSYNCOPTS="-ltrzvh" user=$2 dirExt=$3 if [ "$user" == "" ]; then