Commits for hiram

v333_base to v334_preview (2016-05-23 to 2016-05-31) v334

287b99f249aff556c267674069a219791eb346b9 Mon May 23 10:42:11 2016 -0700

• liftOver per user request refs #17293
  
  • src/hg/makeDb/doc/galGal4.txt - lines changed 58, context: html, text, full: html, text

6ef0466c6789ed5a7cc298708c5aa368a846be13 Tue May 24 11:24:36 2016 -0700

• liftOvers panPan1 to and from panPan2 refs #16036
  
  • src/hg/makeDb/doc/panPan1.txt - lines changed 19, context: html, text, full: html, text
  • src/hg/makeDb/doc/panPan2/initialBuild.txt - lines changed 9, context: html, text, full: html, text

d64350699147541d850e053f5c8fc4a8ce0a6035 Tue May 24 11:37:27 2016 -0700

• cleaning up panPan2 keys check refs #16036
  
  • src/hg/makeDb/schema/all.joiner - lines changed 7, context: html, text, full: html, text

133ccf08aa8687410ced16de5a3780ed409a5611 Tue May 24 11:48:21 2016 -0700

• correct breaks after bioproject and biosample links refs #16036
  
  • src/hg/makeDb/trackDb/bonobo/panPan2/description.html - lines changed 3, context: html, text, full: html, text

5889d1da70608d7b4034b294cd04f4bad143616a Thu May 26 15:13:59 2016 -0700

• default vis hide to avoid frames reference refs #17286
  
  • src/hg/makeDb/trackDb/human/hg38/trackDb.145way.ra - lines changed 3, context: html, text, full: html, text

9c7f6b6786981be3c07606e1590b9bb8cd59bb59 Thu May 26 15:15:06 2016 -0700

• default vis hide to avoid frames reference refs #17286
  
  • src/hg/makeDb/trackDb/human/hg38/trackDb.145way.ra - lines changed 1, context: html, text, full: html, text

a2c2e92fb72d14c1fa46dbaab90250d786707711 Fri May 27 10:34:31 2016 -0700

• lastz runs panPan2 to hg38 refs #16036
  
  • src/hg/makeDb/doc/hg38/lastzRuns.txt - lines changed 81, context: html, text, full: html, text

63bc069ed38f4f9e7fcc3e27c345954e33464c9a Fri May 27 10:37:40 2016 -0700

• lastz runs panPan2 to hg38 refs #16036
  
  • src/hg/makeDb/doc/mm10.txt - lines changed 63, context: html, text, full: html, text

b05ca7f1b0b7c1450be4fadd077e61029b5591d5 Fri May 27 13:02:52 2016 -0700

• adding panPan2 chain net track refs #16036
  
  • src/hg/makeDb/trackDb/trackDb.chainNet.primates.ra - lines changed 54, context: html, text, full: html, text

34a8b41099b13ebad3505bbbc4338b055828d81b Fri May 27 13:11:54 2016 -0700

• adding panPan2 chain net for alpha release refs #16036
  
  • src/hg/makeDb/trackDb/human/chainNetPanPan1.ra - lines changed 15, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/chainNetPanPan2.ra - lines changed 15, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/chainNetPrimate.ra - lines changed 15, context: html, text, full: html, text

0a8f6ec5c4f553b09e53bebd20dafc19d0ec38a6 Tue May 31 13:42:07 2016 -0700

• v334 preview1 refs #17287
  
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text