68315931f4a9ec4272a8df76e6a881339717ac16 braney Wed Jun 1 15:37:37 2016 -0700 changes to support longTabix files in hgIntegrator diff --git src/inc/bedTabix.h src/inc/bedTabix.h index 4ff12b2..9b14416 100644 --- src/inc/bedTabix.h +++ src/inc/bedTabix.h @@ -1,18 +1,20 @@ #ifndef BEDTABIX_H #define BEDTABIX_H #include "linefile.h" struct bedTabixFile { struct lineFile *lf; }; +struct asObject *longTabixAsObj(); + struct bedTabixFile *bedTabixFileMayOpen(char *fileOrUrl, char *chrom, int start, int end); /* Open a bed file that has been compressed and indexed by tabix */ struct bed *bedTabixReadBeds(struct bedTabixFile *btf, char *chromName, int winStart, int winEnd, struct bed * (*loadBed)()); -void bedTabixFileClose(struct bedTabixFile *btf); +void bedTabixFileClose(struct bedTabixFile **btf); #endif //BEDTABIX_H