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assembly releases, new software features, updates and
training seminars by email, subscribe to the
genome-announce mailing list. Please see our
blog for posts about Genome Browser tools, features, projects and more.
+ 27 June 2016 - New Way to Share Sessions - Public Sessions!
+
+ We are excited to announce the release of the
+ Public Sessions
+ page, the newest way to share your UCSC Genome Browser snapshots with your colleagues
+ and the world. The Public Sessions page collects sessions that users have elected to share
+ publicly. Sessions on this page can be filtered based on assembly, name, or a phrase from
+ the description. Sessions can also be sorted based on their popularity or creation date.
+ To add your own sessions to this Public Sessions page, just check the box under "post in
+ public listing" on the session management page.
+
+
+
+ The Genome Browser session management page has also received an
+ update with the release of the new Public Sessions page. Sessions are now arranged in a table,
+ where varying numbers of sessions can be displayed on a page of this table. Sessions can now be
+ filtered and ordered based on session name, primary assembly, and creation date. Clicking on the
+ session name now displays that session in the Genome Browser. Session details, such as the name
+ or the description, can be changed using the "details" button in the new table layout.
+
+
+
+ The release of the new Public Sessions page also marks a change in our session expiration policy.
+ We no longer expire sessions and associated custom tracks four months after their last use.
+ Please note, however, that the UCSC Genome Browser is not a data storage service and that we
+ encourage you to keep local copies of your session contents and custom track data.
+
+
+
+ For more information about using sessions to share snapshots of the UCSC Genome Browser,
+ please see the User Guide or our blog post,
+ "How to share your UCSC screenthoughts."
+
+
+
+ Thanks to Jonathan Casper and Matthew Speir for their work on this new tool.
+
+
+
15 June 2016 - New Official Asian Mirror Released
We are pleased to announce the introduction of a new supported Genome Browser mirror
to serve our users in Asia. The genome-asia server
(http://genome-asia.ucsc.edu),
which is administered by UCSC, is physically located at the
RIKEN Yokohama Campus
in Japan.
Genome-asia is intended as an alternate, faster access point for those Browser users
who are geographically closer to Asia than to the western United States. The mirror
is functionally identical to the U.S.-based server, with one exception. Custom tracks
residing on the U.S. server are not automatically accessible from the genome-asia mirror;
therefore, the use of these custom tracks and saved sessions containing them will require
some manual intervention.
Genome Browser users located in Asia will be automatically redirected to genome-asia
when they click the "Genomes" menu item on the Genome Browser home page, but will have
the option to remain on the U.S.-based server. In addition to the
genome-asia mirror, we continue to support a Europe-based Genome Browser mirror
(http://genome-euro.ucsc.edu)
in Bielefeld, Germany. A third-party mirror in
Aarhus, Denmark,
is available as an emergency backup in the rare event
that our three supported sites are offline.
We wish to express our special thanks to Dr. Hideya Kawaji at the
RIKEN Advanced
Center for Computing and Communication for making this possible. We would also
like to acknowledge the following members of the UCSC Genome Browser team for their efforts:
Galt Barber, Robert Kuhn, Jorge Garcia, and Luvina Guruvadoo.
- 6 June 2016 - New video: Exon-only mode
-
- We are pleased to announce the release to our YouTube channel of a new
- training video,
- in which we demonstrate the recently released Multi-Region feature in
- exon-only mode. This feature is useful for those studying gene expression or
- undertaking whole-exome sequencing. By removing intronic and intergenic regions,
- exon-only mode shows the portion (sometimes as little as a few percent) of the
- genome most useful for these analyses.
-
-
- This video is
- indexed
- to allow easy access to relevant sections and comes with a transcript for the
- hard-of-hearing.
-
-
- Thanks to Robert Kuhn and David Gibson for production.
-
-
+
+
-
-
-
- 10 May 2016 - New Gateway Page!:
- The UCSC Genome Browser team is proud to announce a newly redesigned
- Genome Browser Gateway page.
- Please see our Gateway video for an introduction to these new features.
- Read more.
-
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