Commits for galt

v334_base to v335_preview (2016-06-13 to 2016-06-20) v335

a0f005d70ecb78a51580a8247a1755f9c53e74d2 Mon Jun 13 16:23:42 2016 -0700

• Initial check-in of geoIp basics.
  
  • src/hg/geoIp/README - lines changed 65, context: html, text, full: html, text
  • src/hg/geoIp/continent.as - lines changed 7, context: html, text, full: html, text
  • src/hg/geoIp/continentToNode.as - lines changed 7, context: html, text, full: html, text
  • src/hg/geoIp/country.as - lines changed 7, context: html, text, full: html, text
  • src/hg/geoIp/countryToContinent.as - lines changed 7, context: html, text, full: html, text
  • src/hg/geoIp/countryToNode.as - lines changed 6, context: html, text, full: html, text
  • src/hg/geoIp/gbNode.as - lines changed 9, context: html, text, full: html, text
  • src/hg/geoIp/geoIpCountry.as - lines changed 8, context: html, text, full: html, text
  • src/hg/geoIp/geoIpNode.as - lines changed 8, context: html, text, full: html, text
  • src/hg/geoIp/geoIpToCountry.c - lines changed 93, context: html, text, full: html, text
  • src/hg/geoIp/make-sql - lines changed 10, context: html, text, full: html, text
  • src/hg/geoIp/makefile - lines changed 21, context: html, text, full: html, text

adfd7617b6dad6537fd1fbab1b5f44710fabdf64 Mon Jun 13 16:43:56 2016 -0700

• oops, need newer version of geoIpToCountry.c because we do NOT want dotted-quad format. Simple integers are fast and work well in the database.
  
  • src/hg/geoIp/README - lines changed 2, context: html, text, full: html, text
  • src/hg/geoIp/geoIpToCountry.c - lines changed 18, context: html, text, full: html, text

8554403a3f057a38f35d763783f95ee64b247b80 Tue Jun 14 12:32:30 2016 -0700

• adding a way to run these
  
  • src/hg/geoIp/load-tables - lines changed 11, context: html, text, full: html, text

04b288b4920e8aea8f97f029a4c08c3f2499673b Tue Jun 14 14:24:06 2016 -0700

• Adding detailed HOWTO notes for geoIp update process.
  
  • src/hg/geoIp/README - lines changed 191, context: html, text, full: html, text
  • src/hg/geoIp/README_OLD - lines changed 67, context: html, text, full: html, text

b5f2ebc729a28718f7a8b4c78e86a5bc59de65f6 Wed Jun 15 11:59:46 2016 -0700

• Changing build robot script to use hg38 instead of hg19.
  
  • src/utils/qa/weeklybld/doHgTablesTestRobot.csh - lines changed 2, context: html, text, full: html, text

ccea6bc0ed00118adc05466c7b22531c8d172ad4 Thu Jun 16 18:48:10 2016 -0700

• fixes #16983. Huge 150 million row snp table was not able to be loaded into a hash. Now for snp tables, it just looks up the individual markers with a quick query on the name index. Can handle more than 500,000 markers without timing out.
  
  • src/hg/lib/chromGraphFactory.c - lines changed 40, context: html, text, full: html, text

269421056006b2060ce04dca9660fcbe8f5798af Fri Jun 17 11:42:32 2016 -0700

• updated gbNode.shortLabel for node 3.
  
  • src/hg/geoIp/README - lines changed 1, context: html, text, full: html, text