2845759e8b8bf4950755ca1a1270ecd60abaa19b
max
  Tue Jul 19 12:34:57 2016 -0700
adding an AWK script that Mark wrote. I am using this script for the
uniprot track and am comitting it now so that the uniprot pipeline can
be run

diff --git src/utils/makefile src/utils/makefile
index 45d710f..4446f15 100644
--- src/utils/makefile
+++ src/utils/makefile
@@ -144,31 +144,32 @@
 # list of scripts to install
 
 SCRIPT_FILES = \
         agpToLift \
         bedCollapse.pl \
         bedSingleCover.pl \
         iSync \
         lodToBedScore \
 	mkMafFrames.pl \
 	uniprotLift \
 	bedFixBlockOverlaps \
 	apacheLogParse \
 	extToolsChromeParse \
 	patSeqFilterBulkAndAnnotate \
 	uniprotToTab \
-	patSeqSummarizeDocs
+	patSeqSummarizeDocs \
+	pslProtCnv
 
 # List of all directories to build
 
 ALL_APPS = $(UTILS_APPLIST) $(UCSC_APPS)
 
 # all: builds all utilities here
 
 all: $(ALL_APPS:%=%.all)
 
 %.all:
 	cd $* && echo $* && $(MAKE)
 
 # userAppsB: builds the user application specific programs
 # it would have been nice to be able to use the target name 'userApps'
 # here, but there is a directory by that name, and thus it always exists