Commits for angie

v335_base to v336_preview (2016-07-04 to 2016-07-11) v336

1c31a5719bfc6d4c0ebafb070e95d1ddb8ff4c86 Mon Jun 27 16:53:58 2016 -0700

• Removing unused variable from generated csh script.
  
  • src/hg/utils/automation/doDbSnp.pl - lines changed 1, context: html, text, full: html, text

584d1e4f4473c9bc9b95d0eed878528698e478a2 Wed Jul 6 10:22:48 2016 -0700

• Oops, don't use hardcoded liftUp file name.
  
  • src/hg/utils/automation/doDbSnp.pl - lines changed 2, context: html, text, full: html, text

7a4ec9de23ffd2455a3a660989361d9ea04542f1 Wed Jul 6 10:23:34 2016 -0700

• dbSNP b147 (snp147) tracks for hg19 and hg38. refs #17209
  
  • src/hg/makeDb/doc/hg19.txt - lines changed 163, context: html, text, full: html, text
  • src/hg/makeDb/doc/hg38/variation.txt - lines changed 73, context: html, text, full: html, text
  • src/hg/makeDb/schema/all.joiner - lines changed 19, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/snp147.html - lines changed 36, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/snp147.shared.html - lines changed 470, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/snp147Common.html - lines changed 28, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/snp147Flagged.html - lines changed 29, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/snp147Mult.html - lines changed 25, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 111, context: html, text, full: html, text

381da604707a65b902707c2f86af896d1a7369e5 Wed Jul 6 15:03:24 2016 -0700

• Adding back support for hg.conf settings survey and surveyLabel to hgGateway.
  
  • src/hg/hgGateway/hgGateway.c - lines changed 13, context: html, text, full: html, text
  • src/hg/hgGateway/hgGateway.html - lines changed 2, context: html, text, full: html, text
  • src/hg/js/hgGateway.js - lines changed 12, context: html, text, full: html, text

64df1dc542e3f7653a5d24cfef8d13d55a22aca2 Thu Jul 7 09:44:07 2016 -0700

• Fixing a couple more places that assume that transcript status tables are in the same database as the gene track. refs #17597
  
  • src/hg/hgVai/hgVai.c - lines changed 21, context: html, text, full: html, text