11e45667d4e291b3038ccda729a1cdf5bcaf004a
braney
  Mon Jul 11 15:46:54 2016 -0700
incorporate htslib in kent src, remove USE_BAM, USE_SAMTABIX, USE_TABIX
defines, modify a bunch of makefiles to include kentSrc variable
pointing to top of the tree.

diff --git src/oneShot/sqlToAs/makefile src/oneShot/sqlToAs/makefile
index 7d43b5d..f81a9bc 100644
--- src/oneShot/sqlToAs/makefile
+++ src/oneShot/sqlToAs/makefile
@@ -1,7 +1,8 @@
+kentSrc = ../..
 include ../../inc/common.mk
 
 wordsBySize:
 	cp sqlToAs ${DESTDIR}${BINDIR}/sqlToAs
 
 clean::
 	echo