11e45667d4e291b3038ccda729a1cdf5bcaf004a braney Mon Jul 11 15:46:54 2016 -0700 incorporate htslib in kent src, remove USE_BAM, USE_SAMTABIX, USE_TABIX defines, modify a bunch of makefiles to include kentSrc variable pointing to top of the tree. diff --git src/oneShot/testBandExt/makefile src/oneShot/testBandExt/makefile index f12f08c..af6ce3f 100644 --- src/oneShot/testBandExt/makefile +++ src/oneShot/testBandExt/makefile @@ -1,14 +1,15 @@ +kentSrc = ../.. include ../../inc/common.mk L += -lm MYLIBDIR = ../../lib/${MACHTYPE} MYLIBS = ${MYLIBDIR}/jkOwnLib.a ${MYLIBDIR}/jkweb.a O = testBandExt.o testBandExt: $O ${MYLIBS} ${CC} ${COPT} -o testBandExt $O ${MYLIBS} $L ${STRIP} testBandExt${EXE} clean: rm -f $O