11e45667d4e291b3038ccda729a1cdf5bcaf004a braney Mon Jul 11 15:46:54 2016 -0700 incorporate htslib in kent src, remove USE_BAM, USE_SAMTABIX, USE_TABIX defines, modify a bunch of makefiles to include kentSrc variable pointing to top of the tree. diff --git src/parasol/parasol/makefile src/parasol/parasol/makefile index 0a7b65e..c5c3ea0 100644 --- src/parasol/parasol/makefile +++ src/parasol/parasol/makefile @@ -1,14 +1,15 @@ +kentSrc = ../.. include ../../inc/common.mk L += -lm MYLIBDIR = ../../lib/$(MACHTYPE) MYLIBS = $(MYLIBDIR)/jkweb.a O = parasol.o parasol: $O $(MYLIBS) ${CC} ${COPT} ${CFLAGS} -o ../bin/parasol $O ../lib/$(MACHTYPE)/paralib.a ../../lib/$(MACHTYPE)/jkweb.a ${L} ${STRIP} ../bin/parasol${EXE} clean:: rm -f ${O}