11e45667d4e291b3038ccda729a1cdf5bcaf004a
braney
  Mon Jul 11 15:46:54 2016 -0700
incorporate htslib in kent src, remove USE_BAM, USE_SAMTABIX, USE_TABIX
defines, modify a bunch of makefiles to include kentSrc variable
pointing to top of the tree.

diff --git src/fuzzyFind/makefile src/fuzzyFind/makefile
index a381d53..fa601cf 100644
--- src/fuzzyFind/makefile
+++ src/fuzzyFind/makefile
@@ -1,17 +1,18 @@
+kentSrc = ..
 include ../inc/common.mk
 
 O = ffapp.o 
 
 fuzzyFind.exe: $(O) lib
 	${CC} ${COPT} ${CFLAGS} $O ../lib/$(MACHTYPE)/jkOwnLib.a ../lib/$(MACHTYPE)/jkweb.a ${L} -lm
 	mv ${AOUT} fuzzyFind.exe
 	chmod a+rx fuzzyFind.exe
 
 push:	
 	mv fuzzyFind.exe ../cgi-bin
 
 lib:
 	cd ../lib && ${MAKE}
 
 clean::
 	rm -f ${O}