11e45667d4e291b3038ccda729a1cdf5bcaf004a
braney
  Mon Jul 11 15:46:54 2016 -0700
incorporate htslib in kent src, remove USE_BAM, USE_SAMTABIX, USE_TABIX
defines, modify a bunch of makefiles to include kentSrc variable
pointing to top of the tree.

diff --git src/hg/perf/makefile src/hg/perf/makefile
index da86cb9..8f9ab27 100644
--- src/hg/perf/makefile
+++ src/hg/perf/makefile
@@ -1,20 +1,21 @@
+kentSrc = ../..
 include ../../inc/common.mk
 
 L += -lm ${MYSQLLIBS}
 MYLIBDIR = ../../lib/${MACHTYPE}
 MYLIBS =  ${MYLIBDIR}/jkhgap.a ${MYLIBDIR}/jkweb.a
 
 O = hgTracksRandom.o
 
 hgTracksRandom: ${O} ${MYLIBS}
 	${CC} ${COPT} ${CFLAGS} -o ${DESTDIR}${BINDIR}/hgTracksRandom hgTracksRandom.o ${MYLIBS} $L
 
 rangeQuery: rangeQuery.o ${MYLIBS}
 	${CC} ${COPT} ${CFLAGS} -o ${DESTDIR}${BINDIR}/rangeQuery rangeQuery.o ${MYLIBS} $L
 
 compile: hgTracksRandom.o rangeQuery.o ${MYLIBS}
 	${CC} -o hgTracksRandom hgTracksRandom.o ${MYLIBS} $L
 	${CC} -o rangeQuery rangeQuery.o ${MYLIBS} $L
 
 clean::
 	rm -f ${O} rangeQuery.o rangeQuery hgTracksRandom