11e45667d4e291b3038ccda729a1cdf5bcaf004a braney Mon Jul 11 15:46:54 2016 -0700 incorporate htslib in kent src, remove USE_BAM, USE_SAMTABIX, USE_TABIX defines, modify a bunch of makefiles to include kentSrc variable pointing to top of the tree. diff --git src/olly/sampleToWig/makefile src/olly/sampleToWig/makefile index 8b5f095..f471e0c 100644 --- src/olly/sampleToWig/makefile +++ src/olly/sampleToWig/makefile @@ -1,15 +1,16 @@ +kentSrc = ../.. include ../../inc/common.mk L += -lm MYLIBDIR = ../../lib/$(MACHTYPE) MYLIBS = $(MYLIBDIR)/jkweb.a O = sampleToWig.o sampleToWig: $O $(MYLIBS) ${CC} ${COPT} ${CFLAGS} -o ${BINDIR}/sampleToWig $O $(MYLIBS) $L # ${STRIP} ${BINDIR}/sampleToWig${EXE} clean:: rm -f ${O}