11e45667d4e291b3038ccda729a1cdf5bcaf004a
braney
  Mon Jul 11 15:46:54 2016 -0700
incorporate htslib in kent src, remove USE_BAM, USE_SAMTABIX, USE_TABIX
defines, modify a bunch of makefiles to include kentSrc variable
pointing to top of the tree.

diff --git src/oneShot/killRabbit/makefile src/oneShot/killRabbit/makefile
index 598fa47..84036a9 100644
--- src/oneShot/killRabbit/makefile
+++ src/oneShot/killRabbit/makefile
@@ -1,17 +1,18 @@
+kentSrc = ../..
 include ../../inc/common.mk
 
 
 L += $(MYSQLLIBS) -lm 
 
 O = killRabbit.o
 
 killRabbit: lib $O ../../lib/$(MACHTYPE)/jkweb.a
 	${CC} ${COPT} ${CFLAGS} $O ../../lib/$(MACHTYPE)/jkweb.a $L
 	mv ${AOUT} killRabbit
 	${STRIP} killRabbit${EXE}
 
 lib:
 	cd ../../lib && ${MAKE}
 
 clean::
 	rm -f ${O}