11e45667d4e291b3038ccda729a1cdf5bcaf004a braney Mon Jul 11 15:46:54 2016 -0700 incorporate htslib in kent src, remove USE_BAM, USE_SAMTABIX, USE_TABIX defines, modify a bunch of makefiles to include kentSrc variable pointing to top of the tree. diff --git src/oneShot/tabTable/makefile src/oneShot/tabTable/makefile index 9b1dcec..3556458 100644 --- src/oneShot/tabTable/makefile +++ src/oneShot/tabTable/makefile @@ -1,12 +1,13 @@ +kentSrc = ../.. include ../../inc/common.mk L += /usr/lib/mysql/libmysqlclient.a -lm O = tabTable.o tabTable: $(O) ${CC} ${COPT} ${CFLAGS} -o ${BINDIR}/tabTable $O ../../lib/$(MACHTYPE)/jkweb.a $L clean:: rm -f ${O}