Commits for hiram

v337_preview2 to v337_base (2016-08-08 to 2016-08-15) v337

19669f24e28a8eb75275b32db980cac9363c647c Mon Aug 8 13:09:21 2016 -0700

• lastz to gorGor5 done refs #17817 #17580
  
  • src/hg/makeDb/doc/panTro5/lastzRuns.txt - lines changed 6, context: html, text, full: html, text

a457316487907b46048bd9e48ff3f52f4a5acc6b Mon Aug 8 14:16:31 2016 -0700

• gorGor5 in the pushQ 007874 refs #17580
  
  • src/hg/makeDb/doc/gorGor5/initialBuild.txt - lines changed 83, context: html, text, full: html, text

9d1a581154394267def6c37a74417768ad3fe14e Mon Aug 8 14:28:08 2016 -0700

• panTro5 in the pushQ 007873 refs #17817
  
  • src/hg/makeDb/doc/panTro5/initialBuild.txt - lines changed 12, context: html, text, full: html, text

7272b86c19f04618bc40ac45ecce31bee910e43d Mon Aug 8 14:41:21 2016 -0700

• config files up to date refs #17817
  
  • src/hg/utils/automation/configFiles/colAng1.config.ra - lines changed 26, context: html, text, full: html, text
  • src/hg/utils/automation/configFiles/equCab1.config.ra - lines changed 15, context: html, text, full: html, text
  • src/hg/utils/automation/configFiles/gorGor5.config.ra - lines changed 31, context: html, text, full: html, text
  • src/hg/utils/automation/configFiles/panTro5.config.ra - lines changed 26, context: html, text, full: html, text

60fa030134dbf038678de2223b23c6494944788c Mon Aug 8 14:46:27 2016 -0700

• liftOver to and from panTro3 panTro5 refs #17817
  
  • src/hg/makeDb/doc/panTro3.txt - lines changed 17, context: html, text, full: html, text
  • src/hg/makeDb/doc/panTro5/initialBuild.txt - lines changed 2, context: html, text, full: html, text

07d48778f50cf173833664537688681b12ab6567 Mon Aug 8 14:49:30 2016 -0700

• fix orderKey refs #17580
  
  • src/hg/makeDb/doc/gorGor5/initialBuild.txt - lines changed 2, context: html, text, full: html, text

ec40f7a2d57f40c0b1a379f2d31453942223db37 Mon Aug 8 15:18:39 2016 -0700

• Added ancCey1 - Ancylostoma ceylanicum refs #15209
  
  • src/hg/makeDb/genbank/etc/align.dbs - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/genbank/etc/hgwdev.dbs - lines changed 1, context: html, text, full: html, text

80d45136bda37565ee89b89c57a3abcb34a82c67 Mon Aug 8 15:19:36 2016 -0700

• done with genbank refs #15209
  
  • src/hg/makeDb/doc/worms/ancCey1.txt - lines changed 65, context: html, text, full: html, text

901c127a150f87964448da51b90f21ed6cb7a1d2 Mon Aug 8 15:52:20 2016 -0700

• adding in v85 definitions refs #17863
  
  • src/hg/utils/automation/EnsGeneAutomate.pm - lines changed 220, context: html, text, full: html, text

b96579b4afedef6bd053c08ef65ba4a33cdff496 Mon Aug 8 15:57:25 2016 -0700

• correct one name refs #17863
  
  • src/hg/utils/automation/EnsGeneAutomate.pm - lines changed 1, context: html, text, full: html, text

c74ee0fa21d22224fa560229559c6a9ff972a23c Mon Aug 8 16:02:15 2016 -0700

• correcting lists refs #17863
  
  • src/hg/utils/automation/EnsGeneAutomate.pm - lines changed 1, context: html, text, full: html, text

bf995164e069593e3b8e6042699a9d089838cb1c Tue Aug 9 15:44:35 2016 -0700

• adding ucscToRefSeq search rule refs #17168
  
  • src/hg/makeDb/trackDb/trackDb.ra - lines changed 6, context: html, text, full: html, text

3d9152108f2483d381c6da36d25bcb6f892148a5 Mon Aug 15 10:30:35 2016 -0700

• v337 final build refs #17833
  
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 4, context: html, text, full: html, text

97e40314ec4f1b7bc3ebac5f7d541b224057eae7 Mon Aug 15 10:32:02 2016 -0700

• New version number v337
  
  • src/hg/inc/versionInfo.h - lines changed 1, context: html, text, full: html, text