cd79064dde5eff6904e314e21df8baa54aafc889 max Mon Aug 8 13:23:10 2016 -0700 adding a command to merge two gene expression matrices, currently useful for CIRM CDW, but probably useful for other projects that deal with RNA-seq. No redmine. diff --git src/utils/makefile src/utils/makefile index f533576..530253f 100644 --- src/utils/makefile +++ src/utils/makefile @@ -147,31 +147,32 @@ SCRIPT_FILES = \ agpToLift \ bedCollapse.pl \ bedSingleCover.pl \ iSync \ lodToBedScore \ mkMafFrames.pl \ uniprotLift \ bedFixBlockOverlaps \ apacheLogParse \ extToolsChromeParse \ patSeqFilterBulkAndAnnotate \ uniprotToTab \ patSeqSummarizeDocs \ pslProtCnv \ - pslSameGene + pslSameGene \ + matrixMerge # List of all directories to build ALL_APPS = $(UTILS_APPLIST) $(UCSC_APPS) # all: builds all utilities here all: $(ALL_APPS:%=%.all) %.all: cd $* && echo $* && $(MAKE) # userAppsB: builds the user application specific programs # it would have been nice to be able to use the target name 'userApps' # here, but there is a directory by that name, and thus it always exists