Commits for hiram

v336_base to v337_preview (2016-07-25 to 2016-08-01) v337

b1cb58ccc610a08237e6994c75d46fe4304aa6f6 Thu Jul 28 11:17:01 2016 -0700

• now including cpg island composite, window masker and all gaps refs #13553
  
  • src/hg/utils/automation/asmHubTrackDb.sh - lines changed 53, context: html, text, full: html, text

445376e0fbda613dc5f9d0a4e29917bed5ceacb5 Fri Jul 29 11:29:08 2016 -0700

• constructing gap description page refs #13553
  
  • src/hg/utils/automation/asmHubGap.pl - lines changed 123, context: html, text, full: html, text

4a838fafbfebd353e1848856f68d1eaee1c47e19 Fri Jul 29 11:37:16 2016 -0700

• tweak formatting refs #13553
  
  • src/hg/utils/automation/asmHubGap.pl - lines changed 2, context: html, text, full: html, text

f9103716a0bdcae82d33a075098c7e45225ec636 Fri Jul 29 13:02:25 2016 -0700

• adding description pages refs #13553
  
  • src/hg/utils/automation/asmHubAssembly.pl - lines changed 117, context: html, text, full: html, text
  • src/hg/utils/automation/asmHubGap.pl - lines changed 5, context: html, text, full: html, text
  • src/hg/utils/automation/asmHubTrackDb.sh - lines changed 2, context: html, text, full: html, text
  • src/hg/utils/automation/doAssemblyHub.pl - lines changed 5, context: html, text, full: html, text

974e5d1403723e32a8f351e1a4698b8f87dd3ca3 Fri Jul 29 13:04:08 2016 -0700

• fixing reference to faCount.signature.txt file refs #13553
  
  • src/hg/utils/automation/asmHubHtml.pl - lines changed 1, context: html, text, full: html, text

05b61ae39590ef963a47876444f1a7df2267fc24 Fri Jul 29 15:33:55 2016 -0700

• adding repeat masker description page refs #13553
  
  • src/hg/utils/automation/asmHubRmsk.pl - lines changed 181, context: html, text, full: html, text
  • src/hg/utils/automation/asmHubTrackDb.sh - lines changed 1, context: html, text, full: html, text

fc0750d7a420861f220d29233f6ecb8b87dbc0d5 Fri Jul 29 16:06:07 2016 -0700

• adding CpG description page refs #13553
  
  • src/hg/utils/automation/asmHubCpG.pl - lines changed 142, context: html, text, full: html, text
  • src/hg/utils/automation/asmHubTrackDb.sh - lines changed 4, context: html, text, full: html, text

2e8514ae591dce68b477d63830f00a1a7d45afd0 Fri Jul 29 16:08:34 2016 -0700

• adding asmHub script files to the build refs #13553
  
  • src/hg/utils/automation/makefile - lines changed 8, context: html, text, full: html, text

03ff891a3a68d51d1954643ac3e2a735f01a6caa Mon Aug 1 09:25:08 2016 -0700

• adding simple repeats description refs #13553
  
  • src/hg/utils/automation/asmHubSimpleRepeat.pl - lines changed 106, context: html, text, full: html, text
  • src/hg/utils/automation/asmHubTrackDb.sh - lines changed 2, context: html, text, full: html, text

e34f8748f4fb875c3d1ff4d6e98767b109a3bf5d Mon Aug 1 10:19:43 2016 -0700

• v337 preview1
  
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text