9e2a8a0b99b50e87a71b0bf1f9f6df74f06c708e kate Mon Aug 15 12:48:20 2016 -0700 Finish up ASE tracks. Polish hub for release. refs #17885 diff --git src/hg/lib/gtexAse.as src/hg/lib/gtexAse.as index 7c3ee94..43c7a3b 100644 --- src/hg/lib/gtexAse.as +++ src/hg/lib/gtexAse.as @@ -1,22 +1,22 @@ table gtexAse "BED9+ with additional fields for ASE, coverage, and sample count ( string chrom; "Reference sequence chromosome or scaffold" uint chromStart; "Start position in chromosome" uint chromEnd; "End position in chromosome" string name; "SNP Id" uint score; "Score from 0-1000; derived from median ASE level" char[1] strand; "n/a" uint thickStart; "n/a" uint thickEnd; "n/a" uint itemRgb; "Color based on median ASE value" float medianASE; "Allelic imbalance (0-.5) median" - float coverage; "RNA-seq reads overlapping this position" + float coverage; "RNA-seq reads overlapping this position (median)" uint samples; "Sample count" uint donors; "Donor count" float minASE; "Minimum ASE" float q1ASE; "Q1 ASE" float q3ASE; "Q3 ASE" float maxASE; "Maximum ASE" float stdASE; "ASE standard deviation" )