5a63b70b7e8405a187c8fba71c557cca655e0424 kate Wed Aug 24 12:17:38 2016 -0700 Add config option to display ENS geneId. For synergy with new GTEx gene sorter column. refs #17288 diff --git src/hg/inc/gtexUi.h src/hg/inc/gtexUi.h index 76777f5..a02d7ee 100644 --- src/hg/inc/gtexUi.h +++ src/hg/inc/gtexUi.h @@ -50,25 +50,32 @@ /* Tissue filter */ #define GTEX_TISSUE_SELECT "tissues" /* Gene filter */ #define GTEX_CODING_GENE_FILTER "codingOnly" #define GTEX_CODING_GENE_FILTER_DEFAULT FALSE /* Hide exons */ #define GTEX_SHOW_EXONS "showExons" #define GTEX_SHOW_EXONS_DEFAULT FALSE /* Suppress whiteout behind graph (to show highlight and blue lines) */ #define GTEX_NO_WHITEOUT "noWhiteout" #define GTEX_NO_WHITEOUT_DEFAULT FALSE +/* Item name is gene symbol, accession, or both */ +#define GTEX_LABEL "label" +#define GTEX_LABEL_SYMBOL "name" +#define GTEX_LABEL_ACCESSION "accession" +#define GTEX_LABEL_BOTH "both" +#define GTEX_LABEL_DEFAULT GTEX_LABEL_SYMBOL + void gtexPortalLink(char *geneId); /* print URL to GTEX portal gene expression page using Ensembl Gene Id*/ boolean gtexGeneBoxplot(char *geneId, char *geneName, char *version, boolean doLogTransform, struct tempName *pngTn); /* Create a png temp file with boxplot of GTEx expression values for this gene. * GeneId is the Ensembl gene ID. GeneName is the HUGO name, used for graph title; * If NULL, label with the Ensembl gene ID */ #endif /* GTEXUI_H */