e9aaeb801992b45089a21aa58b6f98a452eb4366 braney Wed Sep 7 13:38:00 2016 -0700 don't grab DNA sequence in hgTracks if not going to be drawing codons or different bases. diff --git src/hg/hgTracks/cds.c src/hg/hgTracks/cds.c index 5005102..cb43a65 100644 --- src/hg/hgTracks/cds.c +++ src/hg/hgTracks/cds.c @@ -1814,30 +1814,34 @@ (psl->tSize - (psl->tStarts[lastBlk] + psl->blockSizes[lastBlk])) : (psl->tStarts[lastBlk] + psl->blockSizes[lastBlk]); drawVertLine(lf, hvg, s, xOff, y, heightPer-1, scale, cdsColor[CDS_QUERY_INSERTION_AT_END]); } } } void baseColorInitTrack(struct hvGfx *hvg, struct track *tg) /* Set up base coloring state (e.g. cache genomic sequence) for tg. * This must be called by tg->drawItems if baseColorDrawSetup is used * in tg->drawItemAt. Peeks at tg->drawItems method to determine whether * tg is linkedFeatures or linkedFeaturesSeries (currently the only * two supported track types -- bed, psl etc. are subclasses of these). */ { +enum baseColorDrawOpt drawOpt = baseColorGetDrawOpt(tg); +if (drawOpt <= baseColorDrawOff) + return; + setGc(); if (initedTrack == NULL || differentString(tg->track, initedTrack)) { int overallStart, overallEnd; boolean isSeries = FALSE; if (tg->drawItems == linkedFeaturesSeriesDraw || tg->drawItems == bamLinkedFeaturesSeriesDraw) isSeries = TRUE; else if (!baseColorCanDraw(tg)) errAbort("baseColorInitTrack: track %s has a type not recognized by baseColorCanDraw.", tg->track); getLinkedFeaturesSpan((struct linkedFeatures *)tg->items, &overallStart, &overallEnd, isSeries); if (overallStart < cachedGenoStart || overallEnd > cachedGenoEnd) {