File Changes for hiram

v339_base to v340_preview (2016-09-26 to 2016-10-03) v340

• src/hg/hgc/hgc.c
  • lines changed 16, context: html, text, full: html, text
    7bc1475cf09a8da21c7cfa2e233f853700524200 Tue Sep 27 11:10:23 2016 -0700
    ncbiRefSeqLink now has empty strings instead of n/a refs #13673
    
  • lines changed 25, context: html, text, full: html, text
    482d00125fb0fcdf3097ed02cf06fde08331f557 Wed Sep 28 22:48:14 2016 -0700
    avoid trouble when there is no RNA sequence for an item in the ncbiRefSeq track refs #13673
    
• src/hg/lib/ncbiRefSeqLink.as
  • lines changed 1, context: html, text, full: html, text
    dfdffa57a180281078f1158f56d01a78e82bc3f9 Tue Sep 27 10:09:55 2016 -0700
    note field is actually a longblob not varchar refs #13673
    
• src/hg/lib/ncbiRefSeqLink.sql
  • lines changed 1, context: html, text, full: html, text
    dfdffa57a180281078f1158f56d01a78e82bc3f9 Tue Sep 27 10:09:55 2016 -0700
    note field is actually a longblob not varchar refs #13673
    
• src/hg/makeDb/doc/chlSab2/initialBuild.txt
  • lines changed 14, context: html, text, full: html, text
    18c9ff3cb02dd9925f4af40e8cb2afa5b8acf1d7 Tue Sep 27 09:09:10 2016 -0700
    add augustusGene build procedure refs #11172
    
  • lines changed 12, context: html, text, full: html, text
    5e2cd01c4cb69426e70eb896a79b9161e09b458e Tue Sep 27 20:22:07 2016 -0700
    added blat server entry refs #11172
    
• src/hg/makeDb/doc/chlSab2/lastzRuns.txt
  • lines changed 27, context: html, text, full: html, text
    a0017e089a5709efe65e3d83e6553685efd04c5b Wed Sep 28 09:40:20 2016 -0700
    lastz run rheMac8<->chlSab2 refs #11172
    
• src/hg/makeDb/doc/hg38/lastzRuns.txt
  • lines changed 70, context: html, text, full: html, text
    50e969e34bee10a3079893be39eb44df3e4ad13b Wed Sep 28 11:38:16 2016 -0700
    add hg38<->chlSab2 procedure refs #11172
    
• src/hg/makeDb/doc/rheMac8/lastzRuns.txt
  • lines changed 73, context: html, text, full: html, text
    a0017e089a5709efe65e3d83e6553685efd04c5b Wed Sep 28 09:40:20 2016 -0700
    lastz run rheMac8<->chlSab2 refs #11172
    
• src/hg/makeDb/trackDb/chimp/panTro5/trackDb.ra
  • lines changed 5, context: html, text, full: html, text
    fd84290ec8d76b0af18a5ac54e6c921369ddad01 Tue Sep 27 10:15:48 2016 -0700
    add gold track search rule refs #17817
    
• src/hg/makeDb/trackDb/gorilla/gorGor5/trackDb.ra
  • lines changed 6, context: html, text, full: html, text
    a2dea7a11090f6d5eb772119af060129fdcbd263 Tue Sep 27 10:13:46 2016 -0700
    add gold track search rule refs #17580
    
• src/utils/qa/weeklybld/buildEnv.csh
  • lines changed 2, context: html, text, full: html, text
    cace572da12cdfc6c4d44cedd17a0ca864294475 Mon Oct 3 10:34:50 2016 -0700
    v340 preview1
    
• src/utils/qa/weeklybld/doHgNearTestRobot.csh
  • lines changed 2, context: html, text, full: html, text
    29c0f39aee9874a3d0688ccf35a7f33657eeb598 Mon Sep 26 20:30:44 2016 -0700
    fixup broken mail command refs #17782
    
• src/utils/qa/weeklybld/revertCommits.csh
  • lines changed 1, context: html, text, full: html, text
    7ce2eedf2b207cf4f95cf1a7bd1dbb83e8b49042 Wed Sep 28 15:40:06 2016 -0700
    now working on hgwdev instead of hgwbeta refs #18152