Commits for mspeir

v339_base to v340_preview (2016-09-26 to 2016-10-03) v340

19d83147960677bdfda960efe6102a865c34b314 Tue Sep 27 13:24:33 2016 -0700

• Putting hg19 NumtS track in Repeats group, moving hg18 chainSelf to Variation + Repeats group, refs #18083
  
  • src/hg/makeDb/trackDb/human/hg18/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 1, context: html, text, full: html, text

f5b67179ac3ebd77c8d502585f1463214fed208a Tue Sep 27 14:13:41 2016 -0700

• Minor correction to usage statement for bigPush script to reflect current behavior of -v option, no redmine
  
  • src/utils/qa/bigPush.sh - lines changed 2, context: html, text, full: html, text

e06f0b8c8055093e52aadfe195d539bcb3bda74f Wed Sep 28 09:01:05 2016 -0700

• Added link to downloads from Ebola portal page. Added link to portal from ebola gateway description page. refs #18149
  
  • src/hg/htdocs/ebolaPortal/index.html - lines changed 7, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/ebola/eboVir3/description.html - lines changed 5, context: html, text, full: html, text

4a2e4209dd33c8e627c179264b266ca25a76a4fa Wed Sep 28 13:06:04 2016 -0700

• Adding alts to list of things we ignore in histogram mode, refs #17987
  
  • src/utils/qa/countPerChrom.csh - lines changed 1, context: html, text, full: html, text

b8ca58b9e58db93eb210de2edf5b36e773f1a163 Fri Sep 30 11:22:09 2016 -0700

• Updating some long and short labels for NCBI RefSeq track, refs #13673
  
  • src/hg/makeDb/trackDb/trackDb.ra - lines changed 14, context: html, text, full: html, text