9f4f2fcb80c1437130199c40a3fba71e469bda6d
braney
  Thu Oct 27 13:16:04 2016 -0700
add bigChain.as and bigLink.as to kent src

diff --git src/hg/lib/bigChain.as src/hg/lib/bigChain.as
new file mode 100644
index 0000000..b8c71f7
--- /dev/null
+++ src/hg/lib/bigChain.as
@@ -0,0 +1,18 @@
+
+table bigChain
+"bigChain pairwise alignment"
+    (
+    string chrom;       "Reference sequence chromosome or scaffold"
+    uint   chromStart;  "Start position in chromosome"
+    uint   chromEnd;    "End position in chromosome"
+    string name;        "Name or ID of item, ideally both human readable and unique"
+    uint score;         "Score (0-1000)"
+    char[1] strand;     "+ or - for strand"
+    uint tSize;         "size of target sequence"
+    string qName;       "name of query sequence"
+    uint qSize;         "size of query sequence"
+    uint qStart;        "start of alignment on query sequence"
+    uint qEnd;          "end of alignment on query sequence"
+    uint chainScore;    "score from chain"
+    )
+