3a5ceb6cf9b3a4869e57ab621d1143fbd0573a5a braney Wed Nov 23 17:01:52 2016 -0800 implements blat results to custom track using bigPsl. Requires hg.conf variable useBlatBigPsl=on, otherwise old behavior exists diff --git src/hg/makefile src/hg/makefile index 92d33bf..7629b42 100644 --- src/hg/makefile +++ src/hg/makefile @@ -6,31 +6,31 @@ # $Id: makefile,v 1.156 2010/03/03 02:53:30 markd Exp $ BROWSER_BINS=cartReset das hgBlat makeDb/hgCgiData hgConvert hgHubConnect \ hgGateway hgGene hgGenome hgIntegrator hgLogin hgPcr hgSession hgSuggest \ hgTables hgTracks hgTrackUi hgUserSuggestion hgc hgApi cartDump near/hgNear \ hgLiftOver hgVai visiGene/hgVisiGene hgMenubar hgPublicSessions \ encode/hgEncodeDataVersions \ encode/hgEncodeVocab encode/hgEncodeApi \ phyloPng hgCustom hgPal hgFileUi hgFileSearch\ makeDb/hgCgiData js htdocs/style hgMirror hgBeacon hgGtexTrackSettings ifdef LOWELAB BROWSER_BINS += $(HOME)/lowelab/src/browser/tooltip $(HOME)/lowelab/src/browser/chooseorg endif -BROWSER_LOADERS = makeDb/hgLoadBed makeDb/hgLoadWiggle makeDb/hgLoadMaf +BROWSER_LOADERS = makeDb/hgLoadBed makeDb/hgLoadWiggle makeDb/hgLoadMaf utils/pslToBigPsl ifneq ($(findstring $(shell hostname),hgwdev hgwbeta),) ENCODE_FILES = encode3/encodeDataWarehouse endif TEST_DIRS = lib autoDtd autoSql blastToPsl checkTableCoords embossToPsl \ genePredSingleCover genePredHisto genePredToBed genePredToGtf \ genePredToMafFrames gbGetEntries hgGetAnn liftAcross liftOver \ mouseStuff mrnaToGene pslCDnaFilter pslDiff pslHisto \ pslPartition pslSelect pslStats pslSwap pslToBed spideyToPsl \ sqlToXml xmlToSql utils BROKEN_TEST_DIRS = liftOver scaffoldFaToAgp