491bae89e94aedf11666a9e662d2d80012cc312d markd Wed Jan 25 07:38:10 2017 -0800 add more information to display of transmap source gene diff --git src/hg/lib/bigTransMap.as src/hg/lib/bigTransMap.as index 5d9087d..fa83ca7 100644 --- src/hg/lib/bigTransMap.as +++ src/hg/lib/bigTransMap.as @@ -30,18 +30,19 @@ uint repMatch; " Number of bases that match but are part of repeats " uint nCount; " Number of 'N' bases " uint seqType; "0=empty, 1=nucleotide, 2=amino_acid" string srcDb; "source organism database names" string srcChrom; "source organism chromosome name" uint srcChromStart; "start position in source chromosome" uint srcChromEnd; "end position in source chromosome" uint srcScore; "source source (faction identity * 1000) uint srcAligned; "fraction of source aligned (faction identity * 1000) string geneName; "gene name" string geneId; "gene identifier" string geneType; "type of gene" string transcriptType; "type of transcript" string chainType; "type of chains used for mapping" string commonName; "common organism name" + string scientificName; "scientific organism name" string orgAbbrev; "organism abbreviation" )