8168bea8c7f6f340082603c0ab1b9bddafae2ea7 donnak Wed Jan 25 15:11:53 2017 -0800 Updated header to incorporate Kate's changes. Will do footer in a separate pass. refs #18504 diff --git src/hg/htdocs/util.html src/hg/htdocs/util.html index 256f6f7..9dfbe6f 100755 --- src/hg/htdocs/util.html +++ src/hg/htdocs/util.html @@ -1,37 +1,39 @@ <!DOCTYPE html> -<!--#set var="TITLE" value="UCSC Genome Browser: Utilities" --> -<!--#include virtual="/gbPageStart.html"--> +<!--#set var="TITLE" value="Genome Browser Utilities" --> +<!--#set var="ROOT" value="." --> + +<!-- Relative paths to support mirror sites with non-standard GB docs install --> +<!--#include virtual="$ROOT/inc/gbPageStart.html" --> <h1>UCSC Genome Browser Utilities</h1> <p> The following tools and utilities created by the UCSC Genome Bioinformatics Group are availble for public use:</p> <ul> <li> <a href="cgi-bin/hgLiftOver">Batch Coordinate Conversion (liftOver)</a> - converts genome coordinates and genome annotation files between assemblies. The current version supports both forward and reverse conversions, as well as conversions between selected species.</li> <li> <a href="http://users.soe.ucsc.edu/~kent/dnaDust/dnadust.html">DNA Duster</a> - removes formatting characters and other non-sequence-related characters from an input sequence. Offers several configuration options for the output format, including translated protein. </li> <li> <a href="http://users.soe.ucsc.edu/~kent/protDust/protDust.html">Protein Duster</a> - removes formatting characters and other non-sequence-related characters from an input sequence. Offers several configuration options for the output format. </li> <li> <a href="cgi-bin/phyloPng">Phylogenetic Tree PNG Maker</a> - creates a PNG image from the phylogenetic tree specification given. Offers several configuration options for branch lengths, normalized lengths, branch labels, legend etc.</li> <li> <a href="http://hgdownload.cse.ucsc.edu/downloads.html#source_downloads">Executable and Source Code Downloads</a> - executable and source code downloads of the Genome Browser, Blat and liftOver. </li> </ul> <!--Commented out until training materials are available <h2>UCSC Genome Browser Educational Materials</h2> --> -<!--#include virtual="/gbPageEnd.html"--> - +<!--#include virtual="$ROOT/inc/gbPageEnd.html" -->