Commits for braney

v346_preview2 to v346_base (2017-03-06 to 2017-03-13) v346

0aeba390e807980ba43b532ec5661a88b0d46f07 Sun Mar 5 06:56:12 2017 -0800

• another change to the genbank process to move to /data
  • src/hg/makeDb/genbank/src/align/gbAlignStep - lines changed 2, context: html, text, full: html, text

de8a40f2cb7cebeeec04f8f82b0609355e186342 Mon Mar 6 10:43:58 2017 -0800

• update genbank.conf to reference most recent CCDS releases
  • src/hg/makeDb/genbank/etc/genbank.conf - lines changed 3, context: html, text, full: html, text

8032314228c8cab933618689dad1bcc2cd9a7cfc Mon Mar 6 14:25:26 2017 -0800

• add ccds tables to tables to push to RR
  • src/hg/makeDb/genbank/etc/gbPerAssemblyTables.txt - lines changed 4, context: html, text, full: html, text

e28fcf053e9780765f3e3f4dda20c49f591dc8ab Mon Mar 6 14:50:04 2017 -0800

• allow ccdsInfo to have entries that aren't in ccdsGEne
  • src/hg/makeDb/genbank/src/ccds/ccdsMkTables.c - lines changed 2, context: html, text, full: html, text

380168126de321e633895cfabafd772d162671df Mon Mar 6 21:14:10 2017 -0800

• don't go to default position if hub for current db is loaded
  • src/hg/lib/cart.c - lines changed 5, context: html, text, full: html, text

42d46bc9d19bcd8ede0d5723005af07659bc7ec9 Thu Mar 9 07:29:10 2017 -0800

• fix nasLar1 upstream gene table
  • src/hg/makeDb/genbank/etc/genbank.conf - lines changed 1, context: html, text, full: html, text

0306db6d76e3a164039b23b9b48a0677e5df03e6 Thu Mar 9 08:25:41 2017 -0800

• first cut at adding support for pslSnake's
  • src/hg/hgTracks/hgTracks.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgTracks/simpleTracks.c - lines changed 6, context: html, text, full: html, text
  • src/hg/hgTracks/snakeTrack.c - lines changed 65, context: html, text, full: html, text
  • src/hg/lib/trackHub.c - lines changed 1, context: html, text, full: html, text

57480fed00898a27858910f057eadb3a61151a7f Sun Mar 12 20:27:24 2017 -0700

• make pslSnakes (temporarily) only available if HAL is available
  • src/hg/hgTracks/simpleTracks.c - lines changed 2, context: html, text, full: html, text
  • src/hg/lib/trackHub.c - lines changed 2, context: html, text, full: html, text