ddd04f80fbc63b2feabf84f335fbb999f6247200 mspeir Thu Mar 30 08:01:05 2017 -0700 changing table dump location, no redmine diff --git src/utils/qa/getRRdumpfile.csh src/utils/qa/getRRdumpfile.csh index 91d1bde..7b67bf4 100755 --- src/utils/qa/getRRdumpfile.csh +++ src/utils/qa/getRRdumpfile.csh @@ -1,88 +1,88 @@ #!/bin/tcsh source `which qaConfig.csh` ################################ # 01-01-05 # gets the filename of the TABLE STATUS dump from RR # using mark's genbank dumps. # # Robert Kuhn ################################ set database="" -set rootpath="/cluster/data/genbank/var/tblstats" # mark's TABLE STATUS dump +set rootpath="/hive/data/outside/genbank/var/tblstats" # mark's TABLE STATUS dump set machine="rr" set dirname="" set machpath="" set dumpfile="" if ( $#argv < 1 || $#argv > 2 ) then echo echo " gets the filename of the TABLE STATUS dump from RR" echo " using mark's genbank dumps." echo " warning: not in real time. uses overnight dump." echo echo " usage: database [hgwdev | hgwbeta | rr ]" echo echo " defaults to rr. optionally gives results for dev or beta" echo exit else set database=$argv[1] endif if ( $#argv == 2 ) then set machine=$argv[2] echo $machine | egrep -qw "hgwdev|hgwbeta|rr" if ( $status ) then echo echo " $machine not a valid machine" echo exit 1 endif endif if ( "rr" == $machine ) then set machine=$tblStatusDumps endif # set path to directory of dated dumps for the proper machine set machpath=$rootpath/$machine if (! -e $machpath ) then echo echo " $machpath does not exist." echo exit 1 endif # set path to latest stored TABLE STATUS dumps set dirname=`ls -1 $machpath | tail -1` set dumpfile=$machpath/$dirname/$database.tbls if (! -e $dumpfile ) then echo echo " database $database -- does not exist on $machine" echo exit 1 else echo $dumpfile endif set debug="false" # set debug="true" if ( $debug == "true" ) then echo echo "database = $database" echo "machine = $machine" echo echo "machpath = $machpath" echo "dumpfile = $dumpfile" echo # exit endif exit