7495791f0d935716eb5a6231e11ba833ef327aed angie Thu Apr 6 10:21:25 2017 -0700 Oops, forgot to implement maxOutRows for annoStreamTab! Thx Chris Lee. refs #12216 diff --git src/hg/lib/hAnno.c src/hg/lib/hAnno.c index 02f5540..97bd5de 100644 --- src/hg/lib/hAnno.c +++ src/hg/lib/hAnno.c @@ -192,31 +192,31 @@ { type = "pgSnp"; } else errAbort("Unrecognized bigData type of file or url '%s'", fileOrUrl); } if (sameString(type, "bigBed") || sameString("bigGenePred", type)) streamer = annoStreamBigBedNew(fileOrUrl, assembly, maxOutRows); else if (sameString(type, "vcfTabix")) streamer = annoStreamVcfNew(fileOrUrl, indexUrl, TRUE, assembly, maxOutRows); else if (sameString(type, "vcf")) streamer = annoStreamVcfNew(fileOrUrl, NULL, FALSE, assembly, maxOutRows); else if (sameString(type, "bigWig")) streamer = annoStreamBigWigNew(fileOrUrl, assembly); else if (sameString(type, "pgSnp")) - streamer = annoStreamTabNew(fileOrUrl, assembly, pgSnpFileAsObj()); + streamer = annoStreamTabNew(fileOrUrl, assembly, pgSnpFileAsObj(), maxOutRows); else if (sameString(type, "bam")) errAbort("Sorry, BAM is not yet supported"); else errAbort("Unrecognized bigData type %s of file or url '%s'", type, fileOrUrl); return streamer; } struct annoStreamer *hAnnoStreamerFromTrackDb(struct annoAssembly *assembly, char *selTable, struct trackDb *tdb, char *chrom, int maxOutRows, struct jsonElement *config) /* Figure out the source and type of data and make an annoStreamer. */ { struct annoStreamer *streamer = NULL; char *db = assembly->name, *dataDb = db, *dbTable = selTable; if (chrom == NULL)