3deb44e4e36652d40e45ae6b3f5e4afb860d644c braney Wed May 3 12:42:56 2017 -0700 make offering custom tracks with blat results the default diff --git src/hg/hgBlat/hgBlat.c src/hg/hgBlat/hgBlat.c index 6f0bf80..86ccfb8 100644 --- src/hg/hgBlat/hgBlat.c +++ src/hg/hgBlat/hgBlat.c @@ -231,31 +231,31 @@ jsInlineF("location.replace('%s');\n", url); printf("\n", url); htmlEnd(); } /* forward declaration to reduce churn */ static void getCustomName(char *database, struct cart *cart, struct psl *psl, char **pName, char **pDescription); void showAliPlaces(char *pslName, char *faName, char *customText, char *database, enum gfType qType, enum gfType tType, char *organism, boolean feelingLucky) /* Show all the places that align. */ { -boolean useBigPsl = cfgOptionBooleanDefault("useBlatBigPsl", FALSE); +boolean useBigPsl = cfgOptionBooleanDefault("useBlatBigPsl", TRUE); struct lineFile *lf = pslFileOpen(pslName); struct psl *pslList = NULL, *psl; char *browserUrl = hgTracksName(); char *hgcUrl = hgcName(); char uiState[64]; char *vis; char unhideTrack[64]; char *sort = cartUsualString(cart, "sort", pslSortList[0]); char *output = cartUsualString(cart, "output", outputList[0]); boolean pslOut = startsWith("psl", output); boolean isStraightNuc = (qType == gftRna || qType == gftDna); int minThreshold = (isStraightNuc ? minMatchShown : 0); sprintf(uiState, "%s=%s", cartSessionVarName(), cartSessionId(cart));