7f5a39fa7ecbf668c7ec0cc077dc7b7821fae06c max Thu May 11 15:27:16 2017 -0700 adding .as files for interactions tracks, refs #13634 diff --git src/hg/lib/ggEventText.as src/hg/lib/ggEventText.as new file mode 100644 index 0000000..aef5c39 --- /dev/null +++ src/hg/lib/ggEventText.as @@ -0,0 +1,21 @@ +table ggLinkEventText +" hgcGeneGraph details of text-mined interactions; a cause influences a theme. Both can be a gene, gegen complex or gene family. " + ( + string eventId; "ID of interaction description" + string causeType; "type of cause of interaction, values: complex, gene or family" + string causeName; "name of cause, as used in text" + lstring causeGenes; "HGNC gene symbols of cause, comma-separated list" + string themeType; "type of theme of interaction, values: complex, gene or family" + string themeName; "name of theme, as used in database" + lstring themeGenes; "gene symbols of theme, comma-separated list" + string relType; "type of relation between cause and theme" + string relSubtype; "subtype of relation, if provided" + string docId; "document docId, number is a PMID" + string sentenceId; "index of sentence in document" + string triggerTokenId; "index of trigger token in sentence" + string themeTokenStart; "index of token where theme starts in sentence" + string themeTokenEnd; "index of token where theme ends in sentence" + string causeTokenStart; "index of token where cause starts in sentence" + string causeTokenEnd; "index of token where cause ends in sentence" + lstring sentence; "full sentence from document" + )