Commits for kate

v348_base to v349_preview (2017-04-24 to 2017-05-01) v349

41d01fd0f045a58696edb753981feef6865f62e5 Mon Apr 24 15:11:24 2017 -0700

• 1. Fix schema file syntax problem, strangely in comment. Caused crash in QA testing. 2. Allow bigBarChart w/o offset/len into matrix. refs #18736
  • src/hg/hgc/barChartClick.c - lines changed 25, context: html, text, full: html, text
  • src/hg/inc/barChartBed.h - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/barChartBed.as - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/barChartBed.sql - lines changed 1, context: html, text, full: html, text

ad2f4709ca23e0f117c52d8dd2768cb565352633 Mon Apr 24 15:21:37 2017 -0700

• Allow bigBarChart w/o offset/len into matrix. refs #18736
  • src/hg/hgc/barChartClick.c - lines changed 3, context: html, text, full: html, text

3baff3293826c9828f1a4f073edb910fe5afc9cc Mon Apr 24 15:33:39 2017 -0700

• Add default string for units, needed by R script args. refs #18736
  • src/hg/hgc/barChartClick.c - lines changed 2, context: html, text, full: html, text

c2aec133d337211ceb481cb51555d4af8bd29f97 Mon Apr 24 17:18:36 2017 -0700

• More robust. Handle missing trackDb settings, matrix columns, bed columns. refs #18736
  • src/hg/hgc/barChartClick.c - lines changed 9, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 8, context: html, text, full: html, text

0c06510e49cf73b4dde95be6196567e51f1dd91a Tue Apr 25 14:34:24 2017 -0700

• Using bigBarChart as native track type. refs #18736
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 33, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/tagTypes.tab - lines changed 9, context: html, text, full: html, text

6a71ffa8818ab34fd8bbbbc927e0f569c3c30386 Tue Apr 25 14:34:56 2017 -0700

• Fix whitespace.
  • src/utils/makefile - lines changed 1, context: html, text, full: html, text

570586117c6ddf545ab46a93775768d1ff04f89d Tue Apr 25 14:37:24 2017 -0700

• Clarify label as per QA request. refs #18736
  • src/hg/hgc/barChartClick.c - lines changed 2, context: html, text, full: html, text

4c7c9dcefffa4971f5b666373e88cec3679301e9 Wed Apr 26 11:30:41 2017 -0700

• Try to accomodate big labels better -- adjust plot margins. refs #18736
  • src/hg/hgc/hgcData/barChartBoxplot.R - lines changed 12, context: html, text, full: html, text

ae9cca16d610361fb1ff65574d60ac709d1e84ec Wed Apr 26 12:47:21 2017 -0700

• Tweak threshold for larger plot margin. refs #18736
  • src/hg/hgc/hgcData/barChartBoxplot.R - lines changed 1, context: html, text, full: html, text

88176813534c36dc29386c0d09f473b99b47fe50 Wed Apr 26 17:00:56 2017 -0700

• Adding settings doc for bigBarChart type track. refs #18736
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbDoc.html - lines changed 55, context: html, text, full: html, text
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbHub.v2.html - lines changed 55, context: html, text, full: html, text
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbLibrary.shtml - lines changed 111, context: html, text, full: html, text

1423088462963a58347aafb3bffe93b96a1665ed Thu Apr 27 12:30:43 2017 -0700

• Fix example in usage message. refs #19232
  • src/hg/regulate/regCluster/regCluster.c - lines changed 1, context: html, text, full: html, text