fc3d3cbf826851710075abad58ed7277d0c250f7
kent
  Mon Apr 24 16:51:39 2017 -0700
Cleaning up newlines in text strings and comments and adding to build.

diff --git src/index/trixContextIndex/trixContextIndex.c src/index/trixContextIndex/trixContextIndex.c
index 04e1e99..a3037ff 100644
--- src/index/trixContextIndex/trixContextIndex.c
+++ src/index/trixContextIndex/trixContextIndex.c
@@ -1,50 +1,53 @@
-/* trixContextIndex - Index in.txt file used with ixIxx to produce a two column file with symbol name and file offset for that line.. */
+/* trixContextIndex - Index in.txt file used with ixIxx to produce a two column file with symbol name 
+ * and file offset for that line.. */
 #include "common.h"
 #include "linefile.h"
 #include "hash.h"
 #include "options.h"
 
 void usage()
 /* Explain usage and exit. */
 {
 errAbort(
-  "trixContextIndex - Index in.txt file used with ixIxx to produce a two column file with symbol name and file offset for that line.\n"
+  "trixContextIndex - Index in.txt file used with ixIxx to produce a two column file with symbol\n"
+  "name and file offset for that line.\n"
   "usage:\n"
   "   trixContextIndex in.txt out.tab\n"
   "options:\n"
   "   -xxx=XXX\n"
   );
 }
 
 /* Command line validation table. */
 static struct optionSpec options[] = {
    {NULL, 0},
 };
 
 void trixContextIndex(char *input, char *output)
-/* trixContextIndex - Index in.txt file used with ixIxx to produce a two column file with symbol name and file offset for that line.. */
+/* trixContextIndex - Index in.txt file used with ixIxx to produce a two column file with symbol name 
+ * and file offset for that line.. */
 {
 struct lineFile *lf = lineFileOpen(input, TRUE);
 FILE *f = mustOpen(output, "w");
 char *line;
 while (lineFileNextReal(lf, &line))
     {
     long long pos = lineFileTell(lf);
     char *word = nextWord(&line);
     if (word == NULL)
         errAbort("Short line %d of %s", lf->lineIx, input);
      fprintf(f, "%s\t%lld\n", word, pos);
     }
 
 carefulClose(&f);
 }
 
 int main(int argc, char *argv[])
 /* Process command line. */
 {
 optionInit(&argc, argv, options);
 if (argc != 3)
     usage();
 trixContextIndex(argv[1], argv[2]);
 return 0;
 }