7727c24e06341a267e7561409f7bf7a3293d88ab max Fri Jun 2 11:54:51 2017 -0700 changes after code review, refs #19510 diff --git src/hg/hgGeneGraph/README.txt src/hg/hgGeneGraph/README.txt index 2a918fa..d64c02a 100644 --- src/hg/hgGeneGraph/README.txt +++ src/hg/hgGeneGraph/README.txt @@ -1,13 +1,13 @@ The gene graph viewer has three dependencies: - the "dot" binary from the graphviz package. It requires a rather recent graphviz version. The exact location can be specified with the hg.conf option graphvizPath. -- the Python2.7 kent-like library "hgLib" from ../pylib -- the Python 2.7 library "MySQLdb". The makefile in ../pylib will add it to CGI-BIN, as a fallback +- the Python >2.6 kent-like library "hgLib" from ../pylib +- the Python >2.6 library "MySQLdb". The makefile in ../pylib will add it to CGI-BIN, as a fallback The gene graph tables are created with the ggTables command. ggTables parses input files constructed with various gg* commands, ggGpmlToTag, ggKgmlToTab, ggMsrToTab, ggPidToTab, ggPpiToTab, ggSpfToTab. These tables are loaded into hgFixed, the prefix of all tables is "gg". The main table is "ggLink". See the makeDoc and /hive/data/genomes/hg19/bed/interactions/