c131ed83cd627d80bd614262fc7d03e8f6d48ea6 max Fri May 19 13:54:04 2017 -0700 improving gene graph .as files a little diff --git src/hg/lib/ggEventDb.as src/hg/lib/ggEventDb.as index 9cd3d3d..f876fdc 100644 --- src/hg/lib/ggEventDb.as +++ src/hg/lib/ggEventDb.as @@ -1,17 +1,17 @@ table ggLinkEventDb -" hgcGeneGraph details of database curated interactions; a cause gene influences a theme gene " +" An interaction between two proteins imported from a curated interaction database. Can have document IDs (PMIDs). Cause and theme (target) are relevant usually only when curated by a pathway database, otherwise the interaction has no direction." ( string eventId; "ID of interaction description" string causeType; "type of cause of interaction, values: complex, gene or family" string causeName; "name of cause, as used in database" lstring causeGenes; "gene symbols of cause, comma-separated list" string themeType; "type of theme of interaction, values: complex, gene or family. If empty: the interaction is a purified complex, with the members in the causeGenes field." string themeName; "name of theme, as used in database" lstring themeGenes; "gene symbols of theme, |-separated list" string relType; "type of relation between cause and theme" string relSubtype; "subtype of relation, if provided" string sourceDb; "source database" lstring sourceId; "identifier in source database for HTML links" string sourceDesc; "description of interaction in source database (e.g. pathway name)" lstring docIds; "list of supporting documents, numbers are PMIDs" )