601f2b5984448488bd26aead6be30b50503fa05b
hiram
  Thu May 25 13:59:53 2017 -0700
indicate rsync instructions no redmine

diff --git src/userApps/README src/userApps/README
index dddbe55..0a906a7 100644
--- src/userApps/README
+++ src/userApps/README
@@ -1,37 +1,43 @@
 ========================================================================
 
 UCSC genome browser 'kent' bioinformatic utilities
 
   These are only the command line bioinformatic utilities
   from the kent source tree.  This is not the genome browser install.
   For the genome browser install, use the instructions from the source tree:
     http://genome-source.cse.ucsc.edu/gitweb/?p=kent.git;a=tree;f=src/product
 
 ========================================================================
 Pre-compiled binaries available:
 
 These binaries built at UCSC may already work in your linux/Mac
-environment.  Please access via:
+environment.  Please access via rsync:
+
+  rsync -a -P rsync://hgdownload.soe.ucsc.edu/genome/admin/exe/linux.x86_64/ ./
+  rsync -a -P rsync://hgdownload.soe.ucsc.edu/genome/admin/exe/macOSX.x86_64/ ./
+
+Or via HTTP:
   http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/
   http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/
-  http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.i386/
 
 Or via FTP:
   ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/
   ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/
-  ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.i386/
+
+Note: access via HTTP or FTP does not copy with the 'execute' bits on,
+to enable execute bits on files in a directory:  chmod +x ./*
 
 ========================================================================
 
 System Requirements:
 
 Linux/Ubuntu/CentOS/Unix/MacOSX operating system
 gnu gcc - C code development system - http://www.gnu.org/software/gcc/
 gnu make - http://www.gnu.org/software/make/
 MySQL development system and libraries - http://dev.mysql.com/
 libpng runtime and development packages - http://www.libpng.org/
 libssl runtime and development packages - http://www.openssl.org/
 
 Optional:
 'git' source code management: http://git-scm.com/downloads
 
@@ -155,31 +161,31 @@
 Installing required packages:
 
 On a MacOS system, you will need the XCode system installed:
    https://developer.apple.com/xcode/
 And the Mac Ports install system: http://www.macports.org/
 
 With the Mac ports and XCode systems installed, you can install
 the additional packages required (and helpful):
 
   sudo port install git-core gnutls rsync libpng mysql55 openssl curl wget
 
 On a typical Linux system, for example Ubuntu, use the apt-get command
 to install additional packages:
 
    sudo apt-get install git libssl-dev openssl mysql-client-5.5 \
-      mysql-client-core-5.5
+      mysql-client-core-5.5 libmysqlclient-dev
 
 Depending upon the version of your Linux/Ubuntu/CentOS operating system,
 the specific version of packages you need may be different than this example.
 
 Please use your standard operating system package management
 install system (e.g. 'yum' on CentOS) to obtain correct versions of
 these packages for your specific operating system version.
 
 See also:
         https://help.ubuntu.com/8.04/serverguide/apt-get.html
         http://www.centos.org/docs/5/html/yum/
 
 ========================================================================
 
 Known Problems: