108d2fdf0aa57ebca7e2a62a028ce2c30cbe8049 kate Wed Jul 5 14:51:47 2017 -0700 Cleanup before merge. refs #15646 diff --git src/hg/lib/gtexEqtlCluster.as src/hg/lib/gtexEqtlCluster.as new file mode 100644 index 0000000..5ccaa44 --- /dev/null +++ src/hg/lib/gtexEqtlCluster.as @@ -0,0 +1,14 @@ +table gtexEqtlCluster +"BED5+ of eQTLs (variants affecting gene expression) with a target (gene or tissue), and lists of secondary targets (e.g. tissues or genes) + ( + string chrom; "Reference sequence chromosome or scaffold" + uint chromStart; "Start position in chromosome" + uint chromEnd; "End position in chromosome" + string name; "Name of variant (rsID or GTEx identifier if none)" + uint score; "Score from 0-1000" + string target; "Name of target (gene or tissue) + uint expCount; "Number of experiment values" + string[expCount] expNames; "Comma separated list of experiment names (e.g. tissue or gene)" + float[expCount] expScores; "Comma separated list of effect size values" + float[expCount] expProbs; "Comma separated list of probability variant is in causal set" + )