File Changes for markd

v356_preview2 to v356_base (2017-10-02 to 2017-10-09) v356

• src/hg/utils/gff3ToGenePred/tests/expected/mm10GencodeTest.attrs
  • lines changed 77, context: html, text, full: html, text
    4d34c553439377b296f1487d764c74c09ad43810 Wed Oct 4 23:47:19 2017 -0700
    added some test cases for attributes
• src/hg/utils/gff3ToGenePred/tests/expected/mm10GencodeTest.gp
  • lines changed 6, context: html, text, full: html, text
    4d34c553439377b296f1487d764c74c09ad43810 Wed Oct 4 23:47:19 2017 -0700
    added some test cases for attributes
• src/hg/utils/gff3ToGenePred/tests/expected/nameAttrNameTest.attrs
  • lines changed 28, context: html, text, full: html, text
    4d34c553439377b296f1487d764c74c09ad43810 Wed Oct 4 23:47:19 2017 -0700
    added some test cases for attributes
• src/hg/utils/gff3ToGenePred/tests/expected/useNameTest.attrs
  • lines changed 28, context: html, text, full: html, text
    4d34c553439377b296f1487d764c74c09ad43810 Wed Oct 4 23:47:19 2017 -0700
    added some test cases for attributes
• src/hg/utils/gff3ToGenePred/tests/input/mm10Gencode.gff3
  • lines changed 150, context: html, text, full: html, text
    4d34c553439377b296f1487d764c74c09ad43810 Wed Oct 4 23:47:19 2017 -0700
    added some test cases for attributes
• src/hg/utils/gff3ToGenePred/tests/makefile
  • lines changed 11, context: html, text, full: html, text
    4d34c553439377b296f1487d764c74c09ad43810 Wed Oct 4 23:47:19 2017 -0700
    added some test cases for attributes
• src/hg/utils/transMapPslToGenePred/tests/expected/cds2InsertTest.mapped.gp
  • lines changed 1, context: html, text, full: html, text
    5b5d272fab3ad3385a7b4069e35993f4571ccd7d Mon Oct 2 12:02:24 2017 -0700
    correctly handle CDS gap closing when there is an insertion in the genome
  • lines changed 1, context: html, text, full: html, text
    15cda765912e9420345a2064ce0ab94925d4a3d9 Mon Oct 2 23:20:12 2017 -0700
    updated test result and added a test
• src/hg/utils/transMapPslToGenePred/tests/expected/codingFillTest.mapped.gp
  • lines changed 5, context: html, text, full: html, text
    15cda765912e9420345a2064ce0ab94925d4a3d9 Mon Oct 2 23:20:12 2017 -0700
    updated test result and added a test
• src/hg/utils/transMapPslToGenePred/tests/expected/fill30Test.mapped.gp
  • lines changed 38, context: html, text, full: html, text
    5b5d272fab3ad3385a7b4069e35993f4571ccd7d Mon Oct 2 12:02:24 2017 -0700
    correctly handle CDS gap closing when there is an insertion in the genome
  • lines changed 6, context: html, text, full: html, text
    15cda765912e9420345a2064ce0ab94925d4a3d9 Mon Oct 2 23:20:12 2017 -0700
    updated test result and added a test
• src/hg/utils/transMapPslToGenePred/tests/expected/fillTest.mapped.gp
  • lines changed 4, context: html, text, full: html, text
    15cda765912e9420345a2064ce0ab94925d4a3d9 Mon Oct 2 23:20:12 2017 -0700
    updated test result and added a test
• src/hg/utils/transMapPslToGenePred/tests/expected/fillTest30.mapped.gp
  • lines changed 38, context: html, text, full: html, text
    5b5d272fab3ad3385a7b4069e35993f4571ccd7d Mon Oct 2 12:02:24 2017 -0700
    correctly handle CDS gap closing when there is an insertion in the genome
• src/hg/utils/transMapPslToGenePred/tests/input/chimp.mapped.psl
  • lines changed 2, context: html, text, full: html, text
    5b5d272fab3ad3385a7b4069e35993f4571ccd7d Mon Oct 2 12:02:24 2017 -0700
    correctly handle CDS gap closing when there is an insertion in the genome
  • lines changed 1, context: html, text, full: html, text
    15cda765912e9420345a2064ce0ab94925d4a3d9 Mon Oct 2 23:20:12 2017 -0700
    updated test result and added a test
• src/hg/utils/transMapPslToGenePred/tests/input/chimp.src.gp
  • lines changed 4, context: html, text, full: html, text
    5b5d272fab3ad3385a7b4069e35993f4571ccd7d Mon Oct 2 12:02:24 2017 -0700
    correctly handle CDS gap closing when there is an insertion in the genome
  • lines changed 4, context: html, text, full: html, text
    15cda765912e9420345a2064ce0ab94925d4a3d9 Mon Oct 2 23:20:12 2017 -0700
    updated test result and added a test
• src/hg/utils/transMapPslToGenePred/tests/makefile
  • lines changed 16, context: html, text, full: html, text
    5b5d272fab3ad3385a7b4069e35993f4571ccd7d Mon Oct 2 12:02:24 2017 -0700
    correctly handle CDS gap closing when there is an insertion in the genome
  • lines changed 2, context: html, text, full: html, text
    15cda765912e9420345a2064ce0ab94925d4a3d9 Mon Oct 2 23:20:12 2017 -0700
    updated test result and added a test
• src/hg/utils/transMapPslToGenePred/transMapPslToGenePred.c
  • lines changed 11, context: html, text, full: html, text
    5b5d272fab3ad3385a7b4069e35993f4571ccd7d Mon Oct 2 12:02:24 2017 -0700
    correctly handle CDS gap closing when there is an insertion in the genome
  • lines changed 1, context: html, text, full: html, text
    93ca761b2f6f6c010203502ea22f569ab460d4c8 Tue Oct 3 12:21:22 2017 -0700
    fixed typo
  • lines changed 1, context: html, text, full: html, text
    8e1263f6d7474b51d69d4560fe4f548675b12c5b Tue Oct 3 12:26:17 2017 -0700
    improved comment (testing redmine)