c20579fc7c537c1736650125c5d264357d2cfa78 angie Mon Sep 18 13:15:16 2017 -0700 Big search & replace: use https instead of http for NCBI URLs. refs #17793 diff --git src/hg/hgc/vcfClick.c src/hg/hgc/vcfClick.c index 496f5c2..80ce88f 100644 --- src/hg/hgc/vcfClick.c +++ src/hg/hgc/vcfClick.c @@ -483,31 +483,31 @@ "%s:%d %s/%s
\n", skipChr(rec->chrom), rec->chromStart+1, rec->alleles[0], rec->alleles[1], skipChr(rec->chrom), rec->chromStart+1, rec->alleles[0], rec->alleles[1]); } // Since these are variants, if it looks like a dbSNP or dbVar ID, provide a link: if (regexMatch(rec->name, "^rs[0-9]+$")) { printf("dbSNP: "); printDbSnpRsUrl(rec->name, "%s", rec->name); puts("
"); } else if (regexMatch(rec->name, "^[en]ss?v[0-9]+$")) { printf("dbVar: "); - printf("%s
\n", rec->name, rec->name); } printCustomUrl(tdb, rec->name, TRUE); boolean hapClustEnabled = cartOrTdbBoolean(cart, tdb, VCF_HAP_ENABLED_VAR, TRUE); if (hapClustEnabled) { static char *formName = "vcfCfgHapCenter"; printf("
\n", formName, hgTracksName()); cartSaveSession(cart); vcfCfgHaplotypeCenter(cart, tdb, tdb->track, FALSE, rec->file, rec->name, seqName, rec->chromStart, formName); printf("
\n"); } char leftBase = rec->alleles[0][0]; unsigned int vcfStart = vcfRecordTrimIndelLeftBase(rec);